Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAPAICNTTETVHGIATSLGAVARQASLPRIVGTVVGITVLVVVALLVPVPTAVELRDWAKSLGAWFPLAFLLVHTVVTVPPFPR-TAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQLNSLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSFAWATLAGLLPGTAAVVILGDAFAGSGSPLLILVSVCTGALGLTGLVYEIRNYRRQHRRMPGYDDPVREPALI |
3TW6 Chain:A ((375-434)) | --------------------------------------------------------------------------------IPDYGRITAYRSASG--FGIRLDGGTSYSGAIITRYYDPLLVKVTAWAPNPL---EAISRMDRALRE---------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TW6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19233 for 286 contacts (-67.2/contact) +
2D Compatibility (PS) -5852 + (NN) 6355 + (LL) 15504
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -7476.0 ( -26.14 by residue)
QMean score : -0.166
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