Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMPLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALAAVRD
3ZS4 Chain:A ((1-244))
-MPLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALAAVRD
General information:
TITO was launched using:
RESULT:
Template:
3ZS4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159013 for 2138 contacts (-74.4/contact) +
2D Compatibility (PS) -26953 + (NN) -12155 + (LL) 208
1D Compatibility (HY) -31600 + (ID) 12200
Total energy: -241713.0 ( -113.06 by residue)
QMean score : 0.750
(partial model without unconserved sides chains):
PDB file :
Tito_3ZS4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZS4-query.scw
PDB file :
Tito_Scwrl_3ZS4.pdb
: