Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALTSR
1ZZO Chain:A ((45-178))
----------------------------------------------TVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT--
General information:
TITO was launched using:
RESULT:
Template:
1ZZO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98858 for 1067 contacts (-92.7/contact) +
2D Compatibility (PS) -14108 + (NN) -4021 + (LL) 3240
1D Compatibility (HY) -18000 + (ID) 6650
Total energy: -138397.0 ( -129.71 by residue)
QMean score : 0.759
(partial model without unconserved sides chains):
PDB file :
Tito_1ZZO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZZO-query.scw
PDB file :
Tito_Scwrl_1ZZO.pdb
: