Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTSHGFSRAAVVGAGLMGRRIAGVLASAGLDVAITDTNAEIL------------HAAAVEAARVAGAGR-------GSVAAAADLAAAIPDADLVIEAVVENLAVKQELFERLATLAPD-AVLATNTSVLPIGAVTERVEDGSRVIGTHFWNPPDLIPVVEVVPSARTAPDTADRVVALLTQVGKLPVRVGRDVPGFIGNRLQHALWREAIALVAEGVCDPKTVDLVVRNTIGLRLATLGPLENADYIGLDLTLAIHDAVIPSLNHDP--HPSPLLRELVAAGQLGARTGHGFLDWPAGAREATTARLAQHIAAQLQANEKGRGT |
3HDH Chain:A ((20-301)) | -----------VIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSSISTSTDAASVVHSTDLVVEAIVENLKVKSELFKRLDKFAAEHTIFASNTSSLQITSLANATTRQDRFAGLHFFNPVPLMKLVEVVKTPMTSQKTLESLVDFSKTLGKHPVSC-KDTPGFIVNRLLVPYLIEAVRLYERGDASKEDIDTAMKLGAGY---PMGPFELLDYVGLDTTKFIIDGWHEMDSQNPLFQPSPAMNKLVAENKFGKKTGEGFYKY----------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141606 for 2005 contacts (-70.6/contact) +
2D Compatibility (PS) -28241 + (NN) -13219 + (LL) 3124
1D Compatibility (HY) -18800 + (ID) 5000
Total energy: -203742.0 ( -101.62 by residue)
QMean score : 0.373
|
|
|