Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDMQLTRDGVAA--CPEMALILEEDDAD
4OV1 Chain:A ((5-69))
LTIHVDQDKCQGHARCKALAPELFDLDDYGNAHEKGDGVVPADL-IDKAWLAKSNCPENAIDITED---
General information:
TITO was launched using:
RESULT:
Template:
4OV1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28930 for 427 contacts (-67.8/contact) +
2D Compatibility (PS) -6645 + (NN) -3690 + (LL) 112
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -44353.0 ( -103.87 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_4OV1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OV1-query.scw
PDB file :
Tito_Scwrl_4OV1.pdb
: