Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDPQLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKPCRATTAGIPLLRLAAQTALLESEALAEMGGNASLKRTRITIAVNADSMATWF---SAVFDGLGDVLLDVRIEDQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVC-DIHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQQRRRRPG |
| 3FD3 Chain:A ((1-193)) | ---------------------------------------------------------------------------------------------RVTLNIATNADSLGTWFLDAVSKFTGGSDYLVNIAVDDQDHTVEWLRGGRVLAAVTAHDKPVQGCRVTPLGVLRYHATASPDFMARHFADGVTPAALARAPGLTFNQKDRLQASWIRTALGEDVSYPTHWLPSTDGFVKASLAGMGWGLNPVQLVAEHLAAGRLVELMPGTPLDIPLYWQVNRLAAERLAGLT--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102596 for 1473 contacts (-69.7/contact) +
2D Compatibility (PS) -20768 + (NN) -7133 + (LL) 8836
1D Compatibility (HY) -16800 + (ID) 4250
Total energy: -142711.0 ( -96.88 by residue)
QMean score : 0.511
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