Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADRVLRGSRLGAVSYETDRNHDLAPRQIARYRTDNGEEFEVPFADDAEIPGTWLCRNGMEGTLIEGDLPEPKKVKPPRTHWDMLLERRSIEELEELLKERLELIRSRRRG
2M4V Chain:A ((2-80))
MADRVLRGSRLGAVSYETDRNHDLAPRQIARYRTDNGEEFEVPFADDAEIPGTWLCRNGMEGTLIEGDLPEPKKVKPPR--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2M4V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1005 for 387 contacts (-2.6/contact) +
2D Compatibility (PS) -8633 + (NN) -6242 + (LL) 3288
1D Compatibility (HY) -8400 + (ID) 3950
Total energy: -24942.0 ( -64.45 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_2M4V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M4V-query.scw
PDB file :
Tito_Scwrl_2M4V.pdb
: