Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLRAIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
2O8X Chain:A ((2-61))
--------------------------------------------------------------------------------------------------------------------GFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLA---------
General information:
TITO was launched using:
RESULT:
Template:
2O8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26965 for 389 contacts (-69.3/contact) +
2D Compatibility (PS) -6628 + (NN) -1823 + (LL) 8904
1D Compatibility (HY) -8800 + (ID) 3000
Total energy: -38312.0 ( -98.49 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_2O8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O8X-query.scw
PDB file :
Tito_Scwrl_2O8X.pdb
: