Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTLSGFWHWAVANLPANVTELPEGVG--DGRELPGGALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFNLFQHAIARAVIFGTYEQR
1FUX Chain:A ((1-162))
----------------FQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK
General information:
TITO was launched using:
RESULT:
Template:
1FUX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66796 for 1271 contacts (-52.6/contact) +
2D Compatibility (PS) -17476 + (NN) -14345 + (LL) 416
1D Compatibility (HY) -7600 + (ID) 3450
Total energy: -109251.0 ( -85.96 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_1FUX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FUX-query.scw
PDB file :
Tito_Scwrl_1FUX.pdb
: