Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSHCSHTFITDNRSPRARRGHAMSTLHKVKAYFGMAPMEDYDDEYYDDRAPSRGYARPRFDDDYGRYDGRDYDDARSDSRGDLRGEPADYPPPGYRGGYADEPRFRPREFDRAEMTRPRFGSWLRNSTRGALAMDPRRMAMMFEDGHPLSKITTLRPKDYSEARTIGERFRDGSPVIMDLVSMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVSPEERRRIAETGFYAYQ |
3P04 Chain:A ((67-140)) | ------------------------------------------------------------------------------------------------------------------------------------------------------STIVPVELHSFEDAQVIGGAFRDGDAVVFDMSLLSREEARRIVDFAAGLCFALHGKMQKIDSVTFAVVPELSNI----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3P04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -15001 for 462 contacts (-32.5/contact) +
2D Compatibility (PS) -8004 + (NN) -3426 + (LL) 5992
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -22689.0 ( -49.11 by residue)
QMean score : 0.542
|
|
|