Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIGFAPVSTPDAAAEAAARARQDSLTKPRGALGSLEDLSVWVASCQQRCPPRQFERARVVVFAGDHGVARSGVSAYPPEVTAQMVANIDAGGAAINALADVAGATVRVADLAVDAD-PLSERIGAHKVRRGSGNIATEDALTNDETAAAITAGQQIADEEVDAGADLLIAGDMGIGNTTAAAVLVAALTDAEPVAVVGFGTGIDDAGWARKTAAVRDALFRVRPVLPDPVGLLRCAGGADLAAIAGFCAQAAVRRTPLLLDGVAVTAAALVAERLAPGAHRWWQAGHRSSEPGHGLALAALGLDPIVDLHMRLGEGTGAAVALMVLRAAVAALSSMATFTEAGVSTRSVDGVDRTAPPAVSP
1J33 Chain:A ((7-333))---------------AQARLRMDQLTKPPRALGYLEEVALRLAALQGRVKP-ELGRGAVVVAAADHGVVAEGVSAYPQEVTRQMVLNFLRGGAAINQFALAADCAVYVLDVGVVGELPDHPGLLKRKVRPGTANLAQGPAMTPEEAERALLAGREAARRAIAEGATLLAAGDMGIGNTTAAAALTAALLGLPPEAVVGRGTGVGEEGLRRKRQAVARALARLHPGM-GPLEVAAEVGGIELVAIAGIYLEGYEAGLPLVLDGFPVTAGALLAWKMAPGLRDHLFAGHLSREPGHRHQLEALGLRPLLDLDLALGEGTGAVLAMPLLRAA-ARILHMATFQEAGVS-----------------


General information:
TITO was launched using:
RESULT:

Template: 1J33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -194776 for 3188 contacts (-61.1/contact) +
2D Compatibility (PS) -35242 + (NN) -15290 + (LL) 1432
1D Compatibility (HY) -23200 + (ID) 8200
Total energy: -275276.0 ( -86.35 by residue)
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_1J33.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J33-query.scw
PDB file : Tito_Scwrl_1J33.pdb: