Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARSRCDQVTSHAVLIGWRAVPRRHGGELPRRGALALGCIALLLMGIVGCTTVTDGTAMPDTNVAPAYRSSVSASVSASAATSSIRESQRQQSLTTKAIRTSCDAL-AATSKDAIDKVNAYVAAFNQGR----NTGPTEGPAIDALNNSASTVSGSLSAALSAQLGDALNAYVDAARAVANAIGAHASTAEFNRRVDRLNDTKTKALTMCVAAF |
3MLS Chain:H ((57-157)) | --------------------------------------------------------------------------------------------------------------------DAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFD-------LWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGG-TAALGCLVKDYF--------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 5210 for 403 contacts (12.9/contact) +
2D Compatibility (PS) -9554 + (NN) 2639 + (LL) 11228
1D Compatibility (HY) -5200 + (ID) 1500
Total energy: 2823.0 ( 7.00 by residue)
QMean score : 0.023
|
|
|