Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIADEIQSGLACTGYPFACDHGGVLPDIYLLGKTLGGGAVPLSAMVADREIFGVVHPGEHGSTFGGNPLAAAIGTPVVSMVVWGECQARSAKLGAHLHQRLADLIGDGAVA--LRGLGWWADVDIERALAIGTDMSMRLADRGVLLKDTYGAALRFAPPLVITAQEID-C------AVRRFADALWEAGS
3LG0 Chain:A ((230-414))
FVADEVQTGLGRTGKLLCTHHYGVKPDVILLGKALSGGHYPISAILANDDVMLVLKPGEHGSTYGGNPLAAAICVEALKVLINEKLCENADKLGAPFLQNLKEQLKDSKVVREVRGKGLLCAIEFKNDLVNVWDICLKFKENGLITRSVHDKTVRLTPPLCITKEQLDECTEIIVKTVKFFDDNL-----
General information:
TITO was launched using:
RESULT:
Template:
3LG0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111449 for 1198 contacts (-93.0/contact) +
2D Compatibility (PS) -18774 + (NN) -5667 + (LL) 204
1D Compatibility (HY) -16800 + (ID) 3350
Total energy: -155836.0 ( -130.08 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_3LG0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LG0-query.scw
PDB file :
Tito_Scwrl_3LG0.pdb
: