Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTNPFDDDNGAFFVLVNDEDQHSLWPVFADIPAGWRVVHGEASRAACLDYVEKNWTDLRPKSLRDAMVED
2N6G Chain:A ((5-73))
MSINPFDDDNGSFFVLVNDEEQHSLWPAFADVPAGWRVVHGEADRAACLEYIEEHWPDIRPKSLRDKLA--
General information:
TITO was launched using:
RESULT:
Template:
2N6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24741 for 365 contacts (-67.8/contact) +
2D Compatibility (PS) -7291 + (NN) -3125 + (LL) 28
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -45829.0 ( -125.56 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_2N6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2N6G-query.scw
PDB file :
Tito_Scwrl_2N6G.pdb
: