Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQPLLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGHWAPGSDFESIRWRLDVWNASAQVSSDVL
4QIH Chain:A ((3-215))
--ARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQPLLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGHW----DFESIRWRLDVWNAS--------
General information:
TITO was launched using:
RESULT:
Template:
4QIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76114 for 1775 contacts (-42.9/contact) +
2D Compatibility (PS) -23256 + (NN) -16507 + (LL) 804
1D Compatibility (HY) -25200 + (ID) 10450
Total energy: -150723.0 ( -84.91 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_4QIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QIH-query.scw
PDB file :
Tito_Scwrl_4QIH.pdb
: