Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFALTSSDIEASTHQPVTGLHH
4WSP Chain:A ((6-87))
---SDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNP----VPEIGDELSVARALSDLGKRMLKVSTHDIEAVTH--------
General information:
TITO was launched using:
RESULT:
Template:
4WSP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16886 for 460 contacts (-36.7/contact) +
2D Compatibility (PS) -8541 + (NN) -3077 + (LL) 532
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -38522.0 ( -83.74 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_4WSP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WSP-query.scw
PDB file :
Tito_Scwrl_4WSP.pdb
: