Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
1SIX Chain:A ((21-164))
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGG----------
General information:
TITO was launched using:
RESULT:
Template:
1SIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85602 for 935 contacts (-91.6/contact) +
2D Compatibility (PS) -15775 + (NN) -6365 + (LL) -192
1D Compatibility (HY) -19600 + (ID) 7200
Total energy: -134734.0 ( -144.10 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_1SIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIX-query.scw
PDB file :
Tito_Scwrl_1SIX.pdb
: