Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASRTMVSSGSEFESAVGYSRAVRIGPLVVVAGTT----GSGD----DIAAQTRDALRRIEIALGQAGATLADVVRTRIYVTDISRWREVGEVHAQAFGKIRPVTSMVEVTALIAPGLLVEIEADAYVGSAVADRNSGAGPKDPSPAGG
2DYY Chain:A ((17-124))
-------------------YSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKD-NDFAKMNEVYAEYFGESKPARVAVEVSRL-PKDVLIEIEAIAY----------------------
General information:
TITO was launched using:
RESULT:
Template:
2DYY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56531 for 680 contacts (-83.1/contact) +
2D Compatibility (PS) -11054 + (NN) -4653 + (LL) 1004
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -82384.0 ( -121.15 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2DYY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DYY-query.scw
PDB file :
Tito_Scwrl_2DYY.pdb
: