Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVAYLRFASVYRSFSSADDFAREIEALRAHRNLSAHS
2WBT Chain:A ((77-126))
--CPLCLMPFSSSVSLKQ--HIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNI----------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WBT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1986 for 299 contacts (-6.6/contact) +
2D Compatibility (PS) -5280 + (NN) -4150 + (LL) 7144
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -7722.0 ( -25.83 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_2WBT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WBT-query.scw
PDB file :
Tito_Scwrl_2WBT.pdb
: