Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAELTETSPETPETTEAIRAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQGRVGFEVKIHRIGADGAA----VLTERTDALIIGPLR-VQFWVCGVFEVDDGRITLWRDYFDVYDMFKGLLRGLVALVVPSLKATL
5AIH Chain:A ((4-116))
-----------------LETVQLFLARVNALDLDGACALLAEDVVYDNVPMPTVHGRAAARAFLSQLPA-TAIDWETHAIAATGDAARGTVLTERTDRFTLADGRTLAIRVMGAFDVADGSITAWRDYFDL-----------------------
General information:
TITO was launched using:
RESULT:
Template:
5AIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60393 for 743 contacts (-81.3/contact) +
2D Compatibility (PS) -11736 + (NN) -2454 + (LL) 3288
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -83745.0 ( -112.71 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_5AIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AIH-query.scw
PDB file :
Tito_Scwrl_5AIH.pdb
: