Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAETAPLRVQLIAKTDFLAPPDVPWTTDADGGPALVEFAGRACYQSWSKPNPKTATNAGYLRHIIDVGHFSVLEHASVSFYITGISRSCTHELIRHRHFSYSQLSQRYVPEKDSRVVVPPGMEDDADLRHILTEAADAARATYSELLAKLEAKFADQPNAILRRKQARQAARAVLPNATETRIVVTGNYRAWRHFIAMRASEHADVEIRRLAIECLRQLAAVAPAVFADFEVTTLADGTEVATSPLATEA
3HZG Chain:A ((2-246))
-AETAPLRVQLIAKTDFLAPPDVPWTTDADGGPALVEFAGRACYQSWSKPNPKTATNAGYLRHIIDVGHFSVLEHASVSFYITGISRSCTHELIRHRHFSYSQLSQRYVPEKDSRVVVPPGMEDDADLRHILTEAADAARATYSELLAKLEAKFADQPNAILRRKQARQAARAVLPNATETRIVVTGNYRAWRHFIAMRASEHADVEIRRLAIECLRQLAAVAPAVFADFEVTTLADGTEVATSPL----
General information:
TITO was launched using:
RESULT:
Template:
3HZG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109092 for 1853 contacts (-58.9/contact) +
2D Compatibility (PS) -26991 + (NN) -16077 + (LL) 652
1D Compatibility (HY) -29600 + (ID) 12250
Total energy: -193358.0 ( -104.35 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_3HZG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HZG-query.scw
PDB file :
Tito_Scwrl_3HZG.pdb
: