Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRSREEYFNLPLKVDESSGTIGKMFVLVIYDIS-----DNRRRASLAKILAGFGYRVQESAFEAMLTKGQLAKLVARIDRFAIDCDNIRIYKIRGVAAVTFYGRGRLVSAEEFVFF
3OQ2 Chain:A ((8-62))
-------------------------MLVLISYDVSFEDPGGQRRLRRIAKACQDYGQRVQYSVFECVVDPAQWAKLKHRL--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OQ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39545 for 287 contacts (-137.8/contact) +
2D Compatibility (PS) -5477 + (NN) -2466 + (LL) 4268
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -49520.0 ( -172.54 by residue)
QMean score : 0.757
(partial model without unconserved sides chains):
PDB file :
Tito_3OQ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OQ2-query.scw
PDB file :
Tito_Scwrl_3OQ2.pdb
: