Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRESIAEADADIASGRTYGEDEIRAEFGVPRRPH
2ODK Chain:A ((5-50))
--VWPVQDAKARFSEFLDACITEGPQI-VSRRGAEEAVLVPIGEWRRLQ--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ODK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16059 for 257 contacts (-62.5/contact) +
2D Compatibility (PS) -5017 + (NN) -1770 + (LL) 3056
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -25890.0 ( -100.74 by residue)
QMean score : 0.667
(partial model without unconserved sides chains):
PDB file :
Tito_2ODK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ODK-query.scw
PDB file :
Tito_Scwrl_2ODK.pdb
: