Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVKNTIAATSFAAAGLAALAVAVSPPAAAGDLVGPGCAEYAAANPTGPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLN-SGQYTVFAPTNAAFSKLPASTIDEL--KTNSSLLTSILTYHVVAGQTSPANVVG--TRQTLQGASVTVTGQGNSLKVGNADVVCGGVSTANATVYMIDSVLMPPA
1W7E Chain:A ((47-156))
--------------------------------------------------------------------------------------LVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSDLTEGMTAETVEGGALTVTLEGGP-KVNGVSISQPDVDASNGVIHVIDGVLMPG-
General information:
TITO was launched using:
RESULT:
Template:
1W7E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53047 for 694 contacts (-76.4/contact) +
2D Compatibility (PS) -11417 + (NN) -3490 + (LL) 5160
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -74744.0 ( -107.70 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_1W7E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W7E-query.scw
PDB file :
Tito_Scwrl_1W7E.pdb
: