Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLRLVSPIKAFADGIVAVAIAVVLMFGLANTPRAVAADERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLN-FTNLNDADGVIWARYNVPWQPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAALTS
3IOS Chain:A ((49-178))
----------------------------------------QLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVR---GRMSQDELTRRVTALT-
General information:
TITO was launched using:
RESULT:
Template:
3IOS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98423 for 1019 contacts (-96.6/contact) +
2D Compatibility (PS) -14110 + (NN) -5990 + (LL) 3756
1D Compatibility (HY) -14400 + (ID) 3600
Total energy: -132767.0 ( -130.29 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_3IOS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IOS-query.scw
PDB file :
Tito_Scwrl_3IOS.pdb
: