Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV
1WQG Chain:A ((2-185))
-IDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV
General information:
TITO was launched using:
RESULT:
Template:
1WQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55487 for 1332 contacts (-41.7/contact) +
2D Compatibility (PS) -20648 + (NN) -13715 + (LL) 208
1D Compatibility (HY) -20400 + (ID) 9200
Total energy: -119242.0 ( -89.52 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1WQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WQG-query.scw
PDB file :
Tito_Scwrl_1WQG.pdb
: