Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLNTERT
4E1A Chain:A ((1-157))
MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLN----
General information:
TITO was launched using:
RESULT:
Template:
4E1A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112792 for 1231 contacts (-91.6/contact) +
2D Compatibility (PS) -17473 + (NN) -11168 + (LL) 308
1D Compatibility (HY) -23600 + (ID) 7850
Total energy: -172575.0 ( -140.19 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_4E1A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E1A-query.scw
PDB file :
Tito_Scwrl_4E1A.pdb
: