Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEIEAFEGACAYWKPRTLPAP
3H5J Chain:A ((5-171))
-EAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLD------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3H5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149756 for 1384 contacts (-108.2/contact) +
2D Compatibility (PS) -17974 + (NN) -9387 + (LL) 2476
1D Compatibility (HY) -23600 + (ID) 8350
Total energy: -206591.0 ( -149.27 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3H5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H5J-query.scw
PDB file :
Tito_Scwrl_3H5J.pdb
: