Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVVAEGAYPYCRLTDQPLSVDEVLAAVSGPEQGGIVIFVGNVRDHNAGHDVTRLFYEAYPPMVIRTLMSIIGRCEDKAEGVRVAVAHRTGELQIGDAAVVIGASAPHRAEAFDAARMCIELLKQEVPIWKKEFSSTGAEWVGDRP
2Q5W Chain:E ((10-137))
-----------------EPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGH--
General information:
TITO was launched using:
RESULT:
Template:
2Q5W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87748 for 909 contacts (-96.5/contact) +
2D Compatibility (PS) -14153 + (NN) -10466 + (LL) 1188
1D Compatibility (HY) -5600 + (ID) 2450
Total energy: -119229.0 ( -131.17 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_2Q5W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q5W-query.scw
PDB file :
Tito_Scwrl_2Q5W.pdb
: