Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLPADPSPTLSAYAHPERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQPLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPGVVPVV |
| 3P3A Chain:A ((4-296)) | --LPADPSPELKQYAHPERLVTADWLASNLGRPGLVIVESDEDVLLYDTGHIPGAVKIDWHTDLNDPAVRDYINGEQFAALMDRKGVTRDDTVVIYGDKSNWWAAYAMWVFHLFGHPDVRLLDGGRDLWVSTGRDTTLEVPTRQTSGYPVVERNDAPIRAFKDDVLRVLGKEPLIDVRSPQEYTGERT-----PEEGALRGGHIPTAVSVPWSKAAYDDGRFRARAELEEIYGFVKPDDKPIVYCRIGERSSHTWFVLTYLLGHPNVRNYDGSWTEWGNAVRVPIVVGPEPGEAP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120510 for 2323 contacts (-51.9/contact) +
2D Compatibility (PS) -31447 + (NN) -21294 + (LL) 580
1D Compatibility (HY) -34800 + (ID) 11350
Total energy: -218821.0 ( -94.20 by residue)
QMean score : 0.517
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