Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVHVVDHPLAAARLTTLRDERTDNAGFRAALRELTLLLIYEATRDAPCEPVPIRTPLAETVGSRLT-KPPLLVPVLRAGLGMVDEAHAALPEAHVGFVGVARDEQTHQPVPYLDSLPDDLTDVPVMVLDPMVATGGSMTHTLGLLISRGAADITVLCVVAAPEGIAALQKAAPNVRLFTAAIDEGLNEVAYIVPGLGDAGDRQFGPR
1O5O Chain:A ((18-218))
----VVDHPLIKHKLTIMRDKNTGPKEFRELLREITLLLAYEATRHLKCEEVEVETPITKTIGYRINDKDIVVVPILRAGLVMADGILELLPNASVGHIGIYRDPETLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLVALIAAPEGVEAVEKKYEDVKIYVAALDERLNDHGYIIPGLGDAGDRLF---
General information:
TITO was launched using:
RESULT:
Template:
1O5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161728 for 1614 contacts (-100.2/contact) +
2D Compatibility (PS) -21627 + (NN) -7204 + (LL) 352
1D Compatibility (HY) -20000 + (ID) 4900
Total energy: -215107.0 ( -133.28 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_1O5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O5O-query.scw
PDB file :
Tito_Scwrl_1O5O.pdb
: