Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREASRAERDRYLTSG-LQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYLEHHDPNR |
2MD0 Chain:A ((27-50)) | ----------------------------------------------------------GDCDND-DKLLEMGYYCPVTCGFCE------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2MD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -772 for 111 contacts (-7.0/contact) +
2D Compatibility (PS) -2173 + (NN) 505 + (LL) 6204
1D Compatibility (HY) -2800 + (ID) 400
Total energy: 564.0 ( 5.08 by residue)
QMean score : 0.498
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