Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
3Q7U Chain:A ((6-231))
-----GEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLD----EYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
General information:
TITO was launched using:
RESULT:
Template:
3Q7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167711 for 1818 contacts (-92.3/contact) +
2D Compatibility (PS) -25037 + (NN) -16482 + (LL) 1072
1D Compatibility (HY) -30400 + (ID) 11100
Total energy: -249658.0 ( -137.33 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_3Q7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q7U-query.scw
PDB file :
Tito_Scwrl_3Q7U.pdb
: