Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNTNPVAAWKALKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVIDSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGYVRDVVERVAPSVLLGRRDGLSRVDEFEQRHVHETVAILMARSSAISERIAGGSLAIVGVTYQLDDGRAVLRDHIGNIGEEV
2A5V Chain:A ((8-210))
-PNTNPVAAWKALKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVIDSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGYVRDVVERVAPSVLLGRRDGLSRVDEFEQRHVHETVAILMARSSAISERIAGGSLAIVGVTYQLDDGRAVLRDHIGNIG---
General information:
TITO was launched using:
RESULT:
Template:
2A5V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151250 for 1682 contacts (-89.9/contact) +
2D Compatibility (PS) -21759 + (NN) -8223 + (LL) 608
1D Compatibility (HY) -27200 + (ID) 10150
Total energy: -217974.0 ( -129.59 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_2A5V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A5V-query.scw
PDB file :
Tito_Scwrl_2A5V.pdb
: