Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEAEAEVQRSVERFKAGTH
1SXV Chain:A ((11-169))
MQFDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEAEAEVQRSVERFKA---
General information:
TITO was launched using:
RESULT:
Template:
1SXV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51346 for 1224 contacts (-41.9/contact) +
2D Compatibility (PS) -17252 + (NN) -10224 + (LL) -76
1D Compatibility (HY) -22400 + (ID) 7900
Total energy: -109198.0 ( -89.21 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_1SXV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SXV-query.scw
PDB file :
Tito_Scwrl_1SXV.pdb
: