Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVARHRAQAAADLASLAAAARLPSGLAAACARATLVARAMRVEHAQCRVVDLDVVVTVEVAVAFAGVATATARAGPAKVPTTPG
2MRA Chain:A ((78-109))
-----------------------------LEVANKIANELGAKQSTTTTDGDTFEVEVILE-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2MRA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15215 for 146 contacts (-104.2/contact) +
2D Compatibility (PS) -3738 + (NN) -1092 + (LL) 4148
1D Compatibility (HY) 0 + (ID) 200
Total energy: -16097.0 ( -110.25 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_2MRA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MRA-query.scw
PDB file :
Tito_Scwrl_2MRA.pdb
: