Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGVLVAAATPIISSASATPANIAGMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIMRDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQGQAR
4M6H Chain:A ((24-237))
-----------------------IAGMVVFIDPGHN------------------------GTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIMRDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQ----
General information:
TITO was launched using:
RESULT:
Template:
4M6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82259 for 1654 contacts (-49.7/contact) +
2D Compatibility (PS) -21194 + (NN) -13212 + (LL) 2316
1D Compatibility (HY) -22000 + (ID) 9500
Total energy: -145849.0 ( -88.18 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_4M6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M6H-query.scw
PDB file :
Tito_Scwrl_4M6H.pdb
: