Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLFGKRKSRATRRAEARAIKARAKLEAKLSAKNEARRIKAAQRAESKALKAQLKARRDSDRAALKVAEAELKVAREGKLLSPTRIRRLLTVSRLLAPILTPVIYRAAMAARGLIDQRRADQLGVPLAQIGRFSGHGA--RLSARVGGAERSLRMVQEKKPKDVETKQFVSAVTNRLTDLSAAVAAAEHMPAKRRRTAHSAISSQLDGIEADLMARLGLT |
2WTB Chain:A ((132-224)) | -----------------------------------------------------------------------------------------------------------------------AAQLGLPELQLGVIPGFGGTQRL-PRLVGLTKALEMILTSKPVKAEEG-------HSLGLIDAVVPPAELVTTARR------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8873 for 387 contacts (22.9/contact) +
2D Compatibility (PS) -6745 + (NN) 2257 + (LL) 14180
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: 12915.0 ( 33.37 by residue)
QMean score : 0.269
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