Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEMKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF
1WA8 Chain:A ((2-99))
--EMKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF
General information:
TITO was launched using:
RESULT:
Template:
1WA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3434 for 550 contacts (6.2/contact) +
2D Compatibility (PS) -10545 + (NN) -4216 + (LL) 352
1D Compatibility (HY) -8000 + (ID) 4900
Total energy: -23875.0 ( -43.41 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_1WA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WA8-query.scw
PDB file :
Tito_Scwrl_1WA8.pdb
: