Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARYRFVVQNWCRFAIWLTRVVAGIRYEVRGLENIPEKPCVILSKHQSTWETFFLSGFFEPLSQVLKRELLYVPFFGWALALLKPIAIDRSQPKLALKQLAKQGDECLKKGAWVLIFPEGTRIPVGQMGKFSRGGTALAVNAGLPVLPIAHNAGQYWPKAGWAKYP-----GTIQVVIGPAMHAEGEGPRAIAEL---NQRAEAWVSETMAEISPIQQRVSHPEPSVVS |
3H3N Chain:X ((38-84)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQRETTVVWDKTTGQPIANAIVWQSRQSSPI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H3N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8646 for 399 contacts (21.7/contact) +
2D Compatibility (PS) -6767 + (NN) 1882 + (LL) 15484
1D Compatibility (HY) 2000 + (ID) 200
Total energy: 21045.0 ( 52.74 by residue)
QMean score : 0.001
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