Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAVYRLLALKARPVEKGLIVVAANIHQLDFLLEDLPDVWLDRLAGTWPGPNTWLVPHQERLPEWVTGVHDSVAVRVTDHPLVQELCHLTG-PLISTSANPAGRPAARTRLRVEQYFHDELDAILGGALGGRRNPSLIRDLVTGQVIRPA
3AJE Chain:A ((16-173))
-----KIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKDIPDKVLEIAQIVWPGPLTFVLKKTERVPKEVTAGLDTVAVRMPAHPIALQLIRESGVPIAAPSANLATRPSPTKAEDVIVDLNGRVDVIIDGGHTFFGVESTIINVTVEPPVLLR
General information:
TITO was launched using:
RESULT:
Template:
3AJE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130502 for 1333 contacts (-97.9/contact) +
2D Compatibility (PS) -17644 + (NN) -15519 + (LL) 488
1D Compatibility (HY) -10400 + (ID) 2950
Total energy: -176527.0 ( -132.43 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_3AJE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AJE-query.scw
PDB file :
Tito_Scwrl_3AJE.pdb
: