Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRWLGVALGCSGLAIALACAGVLLAPADMAASSSSPSPARTVAALPAVDDRPPPPAPVRSQAAAPAYEAEPPVAELDREQAIQFMQMLRDEGDPRSPPLGGLQPRQGATAQELADP--KQYQAFEERQTRELVQAYTSGVQQIPEIRARIEAA----------EQGGERSAEEIDEARAALGQLEMMRDKLQRESPQLLPGDSAPTSPAAP |
4Q4K Chain:A ((97-203)) | -------------------------------------------------------------------FGAEPPVRL--KNIYLSFLE------DPTLLPML-LEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATT------PEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 18013 for 511 contacts (35.3/contact) +
2D Compatibility (PS) -9475 + (NN) 3144 + (LL) 4500
1D Compatibility (HY) -5600 + (ID) 1800
Total energy: 8782.0 ( 17.19 by residue)
QMean score : 0.260
|
|
|