Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYGQG-FEHLYYLLEAAVAGLGVAIAPEPLVRDDLAAGRLAAPWGFIETDARLALWVP---ARLHDPRAGRLAQWLREQLAG |
3KOS Chain:A ((11-203)) | -------------------------------------------------------------------------------------------QEK-LKIGVVGTFAIGCLFPLLSDFKRSYPHIDLHISTHNNRVDPAAEGLDYTIRYGGGAW-HDTDAQYLCSALMSPLCSPTLASQI---QTP-ADILKFPLLRSYRRDE-WALWMQTVGEAPPSPTHNVMVFDSSVTMLEAAQAGMGVAIAPVRMFTHLLSSERIVQP--FLTQIDLGSYWITRLQSRPETPAMREFSRWLTGVLHK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -119695 for 1486 contacts (-80.5/contact) +
2D Compatibility (PS) -19468 + (NN) -3153 + (LL) 6780
1D Compatibility (HY) -13200 + (ID) 2950
Total energy: -151686.0 ( -102.08 by residue)
QMean score : 0.490
|
|
|