Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMKKLMLAVGLFAVAGSAFAAKPCEELKAEID-------AKIKAN----------GVPAYTLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG
3W3A Chain:G ((75-124))
--------------VAGAALGVPPLEGVEAEVENVWGSKVPRLKATFPDGALLSPVGTPAYTLEASRAFRRYAEALIRVANTETRLKKIGEE
General information:
TITO was launched using:
RESULT:
Template:
3W3A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2956 for 112 contacts (26.4/contact) +
2D Compatibility (PS) -3243 + (NN) 2174 + (LL) 1852
1D Compatibility (HY) -2800 + (ID) 850
Total energy: 89.0 ( 0.79 by residue)
QMean score : 0.061
(partial model without unconserved sides chains):
PDB file :
Tito_3W3A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W3A-query.scw
PDB file :
Tito_Scwrl_3W3A.pdb
: