Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQR--LKGADYVVTGDVTEFGRKE----VGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKV-----------LDLAMREAVNKLVN-AVDSGAWKPQNQ |
| 4Q79 Chain:D ((71-250)) | ------------------------------------------------------------------FSTAVPQ---SATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQEQSLTAANIMVEGSIIGYESNVKSGGVGAR-YFGIGADTQYQLDQIAVNLRVVNVSTGEIL-SSVNTSKTILSYEVQAGVFRFID--RLLEGEVGYTSNEPVMLCLMSAIETGVIFLINDGIDRG------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -27746 for 878 contacts (-31.6/contact) +
2D Compatibility (PS) -15733 + (NN) -5277 + (LL) 4732
1D Compatibility (HY) -12800 + (ID) 2300
Total energy: -59124.0 ( -67.34 by residue)
QMean score : 0.399
|
|
|