Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLSIYQASIPTFLRTLGNLSAILKKAAAHAEAKNIDPRIFIDARLAPDMFPLARQVQIASDAAKGAGARLAGLEVPSYADTETTFDELQARIARTVEFLEGIREEQLDGAEERNVTLKVRG--QEISFNGRDFLFGFALPNFFFHVTTAYAILRHNGVELGKMDFLGGA
3QTH Chain:A ((30-164))
------------------------------VEDSSLNESELLNARLVDDMFPFNVQAKIATNFALRACCPLSGKEYKELEGDIDSFCGLKTYVVTAIDYINKLSEPTL---EQLNLNVQDTAGFKEISMPASEYMSSFVLPNFFFHISMVYAIAKNNGVSVTKGDFDGIH
General information:
TITO was launched using:
RESULT:
Template:
3QTH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46505 for 896 contacts (-51.9/contact) +
2D Compatibility (PS) -14346 + (NN) -3260 + (LL) 2532
1D Compatibility (HY) -11200 + (ID) 2150
Total energy: -74929.0 ( -83.63 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_3QTH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QTH-query.scw
PDB file :
Tito_Scwrl_3QTH.pdb
: