Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDLTLHYLYDPLCGWCYGASPLLAA-ACEVTG-LDVRLHGGGMMTDANRQPVGAGLRHYVMPHDLRIAQLTGQPFGKDYFDGLLRDTSAVFDSAPPTAAVLAAEALDGLGAAMLARIQRAHYVEGRRIAERPVLLELGAELGLG-EGFAEAFDACSGEPLRAHFADSRRLMNRLGAAGFPTFALERDGRLQVLDTGRYLGQPDDWRAFLETQLRLAGGSGAVGGAAAPLCRIDGCA
3KZQ Chain:A ((2-176))
--NIKLYYVHDPMCSWCWGYKPTIEKLKQQLPGVIQFEYVVGGLAPDTNL-PMPPEMQQKLEGIWKQIETQLGTKFNYDFWK-LCTPVRSTYQSC---RAVIAAGFQDSY-EQMLEAIQHAYYLRAMPPHEEATHLQLAKEIGLNVQQFKNDMD---GTLLEGVFQDQLSLAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERIIENM---------------------
General information:
TITO was launched using:
RESULT:
Template:
3KZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110858 for 1295 contacts (-85.6/contact) +
2D Compatibility (PS) -18937 + (NN) -9737 + (LL) 548
1D Compatibility (HY) -12800 + (ID) 2450
Total energy: -154234.0 ( -119.10 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_3KZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KZQ-query.scw
PDB file :
Tito_Scwrl_3KZQ.pdb
: