Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIHSSGGVDMKKTASAVWQGGLKDGKGTLSTESGALKDNPYGFNTRFEGAPGTNPEELIGAAHAGCFSMALSMMLGEAGLTAERIETRAEVTLDKQSDGFAITAVHLVLRARVPGADAQTFEQIANKAKAGCPVSKVLNAKISLDASLDG
1QWI Chain:A ((3-141))
----------IHKKGQAHWESDIKRGKGTVSTESGVLNQQPYGFNTRFEGEKGTNPEELIGAAHAACFSMALSLMLGEAGFTPTSIDTTADVSLDKVDAGFAITKIALKSEVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS
General information:
TITO was launched using:
RESULT:
Template:
1QWI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9006 for 903 contacts (-10.0/contact) +
2D Compatibility (PS) -14397 + (NN) -1650 + (LL) 144
1D Compatibility (HY) -1200 + (ID) 2250
Total energy: -28359.0 ( -31.41 by residue)
QMean score : 0.176
(partial model without unconserved sides chains):
PDB file :
Tito_1QWI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QWI-query.scw
PDB file :
Tito_Scwrl_1QWI.pdb
: