Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIGLGIATLLFSATALAAPKPCEELKAEIETKIQSAGVTSYTLEIVRNDEVSDPNMVVGSCENGTKKIIYQKNDD
4M6S Chain:A ((22-63))
-----LGVNVMLRKIWVAAASKPAVEIKQEGDTFYIKVSTTVWTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKM
General information:
TITO was launched using:
RESULT:
Template:
4M6S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3919 for 184 contacts (-21.3/contact) +
2D Compatibility (PS) -4128 + (NN) 2909 + (LL) 356
1D Compatibility (HY) -800 + (ID) 750
Total energy: -6332.0 ( -34.41 by residue)
QMean score : -0.112
(partial model without unconserved sides chains):
PDB file :
Tito_4M6S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M6S-query.scw
PDB file :
Tito_Scwrl_4M6S.pdb
: