Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPLTRLVPLALLLLAGCAGPLPQPDPQMAWVELRSAPANTLLAERLDGERLSDGRYFQVTPGRHVLEVRFQYELYGGSGGGGGGFGEPVQINCYQQVVYDGFEAGRRYRLEVRPQLRRALALLSDERGEVVARSNFQTSRCPPY |
1RNR Chain:A ((19-35)) | -------------------------------------------------------------------------------------FGQPVQVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -866 for 43 contacts (-20.1/contact) +
2D Compatibility (PS) -1711 + (NN) -922 + (LL) 4028
1D Compatibility (HY) -800 + (ID) 450
Total energy: -721.0 ( -16.77 by residue)
QMean score : -0.105
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